Origin of Life
In the natural sciences, abiogenesis, the question of the origin of life, is the study of how life on Earth might have emerged from non-life. Scientific consensus is that abiogenesis occurred sometime between 4.4 billion years ago, when water vapor first liquefied, and 2.7 billion years ago, when the ratio of stable isotopes of carbon (12C and 13C ), iron and sulphur points to a biogenic origin of minerals and sediments and molecular biomarkers indicate photosynthesis. This topic also includes panspermia and other exogenic theories regarding possible extra-planetary or extra-terrestrial origins of life, thought to have possibly occurred sometime over the last 13.7 billion years in the evolution of the Universe since the Big Bang.
Origin of life studies is a limited field of research despite its profound impact on biology and human understanding of the natural world. Progress in this field is generally slow and sporadic, though it still draws the attention of many due to the eminence of the question being investigated. Several theories have been proposed, most notably RNA world hypothesis.
History of the concept in science
In the early Nineteenth Century and before people frequently believed that life arose spontaneously from non-living matter.
Darwin & Pasteur
By the middle of the 19th century Pasteur and others had demonstrated that living organisms did not arise spontaneously from non-living matter; the question therefore arose of how life might have come about within a naturalistic framework. In a letter to Joseph Dalton Hooker on February 1, 1871, Charles Darwin made the suggestion that the original spark of life may have begun in a "warm little pond, with all sorts of ammonia and phosphoric salts, lights, heat, electricity, etc. present, so that a protein compound was chemically formed ready to undergo still more complex changes". He went on to explain that "at the present day such matter would be instantly devoured or absorbed, which would not have been the case before living creatures were formed."[9] In other words, the presence of life itself makes the search for the origin of life dependent on the sterile conditions of the laboratory.
Haldane & Oparin
No real progress was made until 1924 when Aleksandr Ivanovich Oparin experimentally showed that atmospheric oxygen prevented the synthesis of the organic molecules that are the necessary building blocks for the evolution of life. In his The Origin of Life on Earth, Oparin argued that a "primeval soup" of organic molecules could be created in an oxygen-less atmosphere through the action of sunlight. These would combine in ever-more complex fashion until they dissolved into a coacervate droplet. These droplets would "grow" by fusion with other droplets, and "reproduce" through fission into daughter droplets, and so have a primitive metabolism in which those factors which promote "cell integrity" survive, those that do not become extinct. Many modern theories of the origin of life still take Oparin's ideas as a starting point. Around the same time J. B. S. Haldane also suggested that the earth's pre-biotic oceans - very different from their modern counterparts - would have formed a "hot dilute soup" in which organic compounds, the building blocks of life, could have formed. This idea was called biopoiesis or biopoesis, the process of living matter evolving from self-replicating but nonliving molecules.
Current models
There is no truly "standard model" of the origin of life. But most currently accepted models build in one way or another upon a number of discoveries about the origin of molecular and cellular components for life, which are listed in a rough order of postulated emergence:
- Plausible pre-biotic conditions result in the creation of certain basic small molecules (monomers) of life, such as amino acids. This was demonstrated in the Miller-Urey experiment by Stanley L. Miller and Harold C. Urey in 1953.
- Phospholipids (of an appropriate length) can spontaneously form lipid bilayers, a basic component of the cell membrane.
- The polymerization of nucleotides into random RNA molecules might have resulted in self-replicating ribozymes (RNA world hypothesis).
- Selection pressures for catalytic efficiency and diversity result in ribozymes which catalyse peptidyl transfer (hence formation of small proteins), since oligopeptides complex with RNA to form better catalysts. Thus the first ribosome is born, and protein synthesis becomes more prevalent.
- Proteins outcompete ribozymes in catalytic ability, and therefore become the dominant biopolymer. Nucleic acids are restricted to predominantly genomic use.
The origin of the basic biomolecules, while not settled, is less controversial than the significance and order of steps 2 and 3. The basic chemicals from which life was thought to have formed are:
- methane (CH4),
- ammonia (NH3),
- water (H2O),
- hydrogen sulfide (H2S),
- carbon dioxide (CO2) or carbon monoxide (CO), and
- phosphate (PO43-).
Molecular oxygen (O2) and ozone (O3) were either rare or absent.
As of 2007, no one has yet synthesized a "protocell" using basic components which would have the necessary properties of life (the so-called "bottom-up-approach"). Without such a proof-of-principle, explanations have tended to be short on specifics. However, some researchers are working in this field, notably Steen Rasmussen at Los Alamos National Laboratory and Jack Szostak at Harvard University. Others have argued that a "top-down approach" is more feasible. One such approach, attempted by Craig Venter and others at The Institute for Genomic Research, involves engineering existing prokaryotic cells with progressively fewer genes, attempting to discern at which point the most minimal requirements for life were reached. The biologist John Desmond Bernal, coined the term Biopoesis for this process, and suggested that there were a number of clearly defined "stages" that could be recognised in explaining the origin of life.
- Stage 1: The origin of biological monomers
- Stage 2: The origin of biological polymers
- Stage 3: The evolution from molecules to cell
Bernal suggested that Darwinian evolution may have commenced early, some time between Stage 1 and 2.
Origin of organic molecules
Miller's experimentsIn 1953 a graduate student, Stanley Miller, and his professor, Harold Urey, performed an experiment that proved organic molecules could have spontaneously formed on Early Earth from inorganic precursors. The now-famous “Miller-Urey experiment” used a highly reduced mixture of gases - methane, ammonia and hydrogen – to form basic organic monomers, such as amino acids. Whether the mixture of gases used in the Miller-Urey experiment truly reflects the atmospheric content of Early Earth is a controversial topic. Other less reducing gases produce a lower yield and variety. It was once thought that appreciable amounts of molecular oxygen were present in the prebiotic atmosphere, which would have essentially prevented the formation of organic molecules; however, the current scientific consensus is that such was not the case. See Oxygen Catastrophe.
Simple organic molecules are, of course, a long way from a fully functional self-replicating life form. But in an environment with no pre-existing life these molecules may have accumulated and provided a rich environment for chemical evolution ("soup theory"). On the other hand, the spontaneous formation of complex polymers from abiotically generated monomers under these conditions is not at all a straightforward process. Besides the necessary basic organic monomers, compounds that would have prohibited the formation of polymers were formed in high concentration during the experiments.
It can be argued that the most crucial challenge unanswered by this theory is how the relatively simple organic building blocks polymerise and form more complex structures, interacting in consistent ways to form a protocell. For example, in an aqueous environment hydrolysis of oligomers/polymers into their constituent monomers would be favored over the condensation of individual monomers into polymers. Also, the Miller experiment produces many substances that would undergo cross-reactions with the amino acids or terminate the peptide chain.
Fox's experiments
In the 1950s and 1960s Sidney W. Fox, studied the spontaneous formation of peptide structures under conditions that might plausibly have existed early in Earth's history. He demonstrated that amino acids could spontaneously form small peptides. These amino acids and small peptides could be encouraged to form closed spherical membranes, called microspheres. Fox described these formations as protocells, protein spheres that could grow and reproduce.[citation needed]
Eigen's hypothesis
In the early 1970s the problem of the origin of life was approached by Manfred Eigen and Peter Schuster of the Max Planck Institute for Biophysical Chemistry. They examined the transient stages between the molecular chaos and a self replicating hypercycle in a prebiotic soup.[10]
In a hypercycle, the information storing system (possibly RNA) produces an enzyme, which catalyzes the formation of another information system, in sequence until the product of the last aids in the formation of the first information system. Mathematically treated, hypercycles could create quasispecies, which through natural selection entered into a form of Darwinian evolution. A boost to hypercycle theory was the discovery that RNA, in certain circumstances forms itself into ribozymes, a form of RNA enzyme.[citation needed]